Characteristics of Cellulase Producing Bacteria Isolated from Gold Mine Soil

Authors

  • Fatmila Amirah Radwa Department of Biology, Faculty of Mathematics and Sciences, IPB University IPB Darmaga Campus, Bogor 16680, Indonesia
  • Nisa Rachmania Mubarik Department of Biology, Faculty of Mathematics and Sciences, IPB University IPB Darmaga Campus, Bogor 16680, Indonesia https://orcid.org/0000-0002-0012-0518
  • Popi Asri Kurniatin Department of Biology, Faculty of Mathematics and Sciences, IPB University IPB Darmaga Campus, Bogor 16680, Indonesia https://orcid.org/0000-0002-9522-2129

DOI:

https://doi.org/10.18343/jipi.31.3.418

Keywords:

Biodegradation, cellulolytic bacteria, cellulose, organic matter, post-mining

Abstract

Land degradation has created an urgent need for innovative restoration strategies based on microbial applications. The microbiological approach using cellulase enzymes produced by cellulolytic bacteria is a prospective step to address problems related to land restoration and biodegradation of complex organic matter in the environment. This study aimed to isolate and characterize cellulolytic bacteria from post-mining soil collected at the Martabe gold mine site in South Sumatra, Indonesia. Isolation and selection of cellulolytic bacteria was performed on 1% carboxymethyl cellulose (CMC) medium, resulting of two non-pathogenic Gram-positive isolates, TSUS3.4.1 and TSUS3.4.2, with cellulolytic index of 2.51 and 2.26, respectively. Hemolysis tests on blood agar confirmed the semi- and non-pathogenic activity of both isolates. The growth curve and enzyme-specific activity was tested and measured in minimal nutrition broth with addition of 1% CMC with the highest activity values of 0.37 U/mg for TSUS3.4.1 and 0.17 U/mg for TSUS3.4.2 at the 27th hour after incubation. TSUS3.4.1 isolate has optimum cellulase activity at pH 6 and 30°C. TSUS3.4.2 isolate has optimum cellulase activity at pH 7 and temperature 30°C. These findings highlight the isolates potential positioning them as promising candidates for biotechnological applications in post-mining land rehabilitation and organic waste degradation.

Keywords: biodegradation, cellulolytic bacteria, cellulose, organic matters, post-mining

Downloads

Download data is not yet available.

References

Andreaus J, Azevedo H, Cavaco-Paulo A. 1999. Effects of temperature on the cellulose binding ability of cellulase enzymes. Journal of Molecular Catalysis B: Enzymatic. 7: 233–239. https://doi.org/10.1016/S1381-1177(99)00032-6 DOI: https://doi.org/10.1016/S1381-1177(99)00032-6

Anggriani L, Larasari F, Alvionita DN. 2023. Isolation of cellulolytic bacteria from the soil surrounding a final landfill site. Diversitas Hayati. 1(2): 18–27. https://doi.org/10.30631/12.18-27 DOI: https://doi.org/10.30631/12.18-27

Balla A, Silini A, Cherif-Silini H, Bouket AC, Boudechicha A, Luptakova L, Alenezi FN, Belbahri L. 2022. Screening of cellulolytic bacteria from various ecosystems and their cellulases production under multi-stress conditions. Catalysts. 12(769): 1–29. https://doi.org/10.30631/12.18-27 DOI: https://doi.org/10.3390/catal12070769

Borthakur I, Devi RP, Karthikeyan S, Ramesh D, Muruganathi D. 2024. Microbial cellulase production: current technologies and future prospects. Journal of Pure and Applied Microbiology. 18(4): 2188–2204. https://doi.org/10.22207/JPAM.18.4.08 DOI: https://doi.org/10.22207/JPAM.18.4.08

Bradford MM. 1976. A rapid and sensitif method for the quantition of microorganism quantities of protein utilizing the principle of protein binding. Journal of Analytical Chemistry. 72: 248–254. https://doi.org/10.1016/0003-2697(76)90527-3 DOI: https://doi.org/10.1016/0003-2697(76)90527-3

Bui HB. 2014. Isolation of cellulolytic bacteria, including Actinomycetes, from coffee exocarps in coffee-producing areas in Vietnam. International Journal of Recycling of Organic Waste in Agriculture. 3: 1–8. https://doi.org/10.1007/s40093-014-0048-0 DOI: https://doi.org/10.1007/s40093-014-0048-0

Chetan DM, Nataraja S, Krishnappa M. 2011. Effect of inorganic ions and ph on cellulase enzyme activity in crude extracts isolated from solid wastes microbes. Journal of Pure and Applied Microbiology. 5(1): 217–222.

Choi YW, Hodgkiss IJ, Hyde KD. 2005. Enzyme production by endophytes of Brucea javanica. International Journal of Agricultural Technology. 1(1): 55–66.

Datta R. 2024. Enzymatic degradation of cellulose in soil: a review. Heliyon. 10: 1–18. https://doi.org/10.1016/j.heliyon.2024.e24022 DOI: https://doi.org/10.1016/j.heliyon.2024.e24022

Dewiyanti I, Darmawi D, Muchlisin ZA, Helmi TZ, Arisa II, Rahmiati R, Destri E. 2022. Cellulase enzyme activity of the bacteria isolated from mangrove ecosystem in Aceh Besar and Banda Aceh. IOP Conference Series: Earth and Environmental Science. 951(1): 1–11. https://doi.org/10.1088/1755-1315/951/1/012113 DOI: https://doi.org/10.1088/1755-1315/951/1/012113

Fu Z, Zhong L, Tian Y, Bai X, Liu J. 2024. Identification of cellulose-degrading bacteria and assesment of their potential value for the production of bioethanol from coconut oil cake waste. Microorganisms. 12(2): 240. https://doi.org/10.3390/microorganisms12020240 DOI: https://doi.org/10.3390/microorganisms12020240

Gupta P, Samant K, Sahu A. 2012. Isolation of cellulose-degrading bacteria and determination of their cellulolytic potential. International Journal of Microbiology. 2012: 1–5. https://doi.org/10.1155/2012/578925 DOI: https://doi.org/10.1155/2012/578925

Habibi Y, Lucia LA, Rojas OJ. 2010. Cellulose nanocrystals: chemistry, self-assembly, and applications. Chemical Reviews. 110(6): 3479–3500. https://doi.org/10.1021/cr900339w DOI: https://doi.org/10.1021/cr900339w

Holt G, NR Kreig, PHA Sneath, JT Stanley, ST Williams. 1994. Bergeys manual determinative bacteriology. Baltimore: Williamn and Wilkins Baltimore. p 1124.

Kabir FM, Ju LK. 2023. On optimization of enzymatic processes: temperature effects on activity and long-term deactivation kinetics. Process Biochemistry. 130: 734–746. https://doi.org/10.1016/j.procbio.2023.05.031 DOI: https://doi.org/10.1016/j.procbio.2023.05.031

Meryandini A, Widosari W, Maranatha B, Sunarti TC, Rachmania N. 2009. Isolasi bakteri selulolitik dan karakterisasi enzimnya. Makara Journal of Science. 13(1): 33–38. https://doi.org/10.7454/mss.v13i1.369 DOI: https://doi.org/10.7454/mss.v13i1.369

Miller GL. 1959. Use of Dinitrosalicylic Acid reagent for determination of reducing sugar. Journal of Analytical Chemistry. 31: 426–428. https://doi.org/10.1021/ac60147a030 DOI: https://doi.org/10.1021/ac60147a030

Mubarik NR, Damayanti E, Listyowati S. 2003. Isolasi dan karakterisasi amilase dari kapang alkalotoleran asal limbah cair tapioka. Biota. 8(1): 1–8. https://doi.org/10.24002/biota.v8i1.2786 DOI: https://doi.org/10.24002/biota.v8i1.2786

Murugesan K, Adesanmi A, Gbenro T. 2019. Isolation and identification of cellulolytic bacteria from wood industry soil in Kancheepuram, Chennai. International Journal of Advances in Scientific Research and Engineering. 5(7): 144–149. https://doi.org/10.31695/IJASRE.2019.33420 DOI: https://doi.org/10.31695/IJASRE.2019.33420

Pratiwi N, Ardiansyah A. 2022. Pemanfaatan limbah pertanian sebagai substrat untuk memproduksi enzim selulase oleh Aspergillus niger. Jurnal Pengembangan Agroindustri Terapan. 1(1): 24–31.

Rahayu R, Putra P, Pujo P. 2024. Organic waste management strategy to create sustainable circular economy using swot and qspm model. International Journal of Science and Environment. 4(3): 97–106. https://doi.org/10.51601/ijse.v4i3.108 DOI: https://doi.org/10.51601/ijse.v4i3.108

Rastogi G, Muppidi GL, Gurram RN, Adhikari A, Bischoff KM, Hughes SR, Apel WA, Bang SS, Dixon DJ, Sani RK. 2009. Isolation and characterization of cellulose-degrading bacteria from deep subsurface of the homstake gold mine, Lead, South Dakota, USA. Journal of Industrial Microbiology and Biotechnology. 36: 585–598. https://doi.org/10.1007/s10295-009-0528-9 DOI: https://doi.org/10.1007/s10295-009-0528-9

Sethi S, Datta A, Gupta BL, Gupta S. 2013. Optimization of cellulase production from bacteria isolated from soil. ISRN Biotechnology. 2013(1): 1–7. https://doi.org/10.5402/2013/985685 DOI: https://doi.org/10.5402/2013/985685

Soares FL, Melo IS, Dias ACF, Andreote FD. 2012. Cellulolytic bacteria from soils in harsh environments. World Journal of Microbiology and Biotechnology. 28(1): 2195–2203. https://doi.org/10.1007/s11274-012-1025-2 DOI: https://doi.org/10.1007/s11274-012-1025-2

Theater RM, Wood PJ. 1982. Use of congo red- polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from bovine rumen. Applied and Environmental Microbiology. 43(4): 777–780. https://doi.org/10.1128/aem.43.4.777-780.1982 DOI: https://doi.org/10.1128/aem.43.4.777-780.1982

Verma V, Kumar P, Gupta S, Yadav S, Dhanda RS, Thorlacius H, Yadav M. 2020. α hemolysin of uropathogenic E. coli regulates NLRP3 infammasome activation and mitochondrial dysfunction in THP 1 macrophages. Scientific Reports. 2020(10): 1–17. https://doi.org/10.1038/s41598-020-69501-1 DOI: https://doi.org/10.1038/s41598-020-69501-1

Downloads

Additional Files

Published

2026-05-27

How to Cite

Amirah Radwa, F., Mubarik, N.R. and Kurniatin, P.A. (2026) “Characteristics of Cellulase Producing Bacteria Isolated from Gold Mine Soil”, Jurnal Ilmu Pertanian Indonesia, 31(3), pp. 418–425. doi:10.18343/jipi.31.3.418.